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TTK
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This is the complete list of members for ttkContourTreeAlignment, including all inherited members.
| AddInputData(vtkDataSet *) | ttkAlgorithm | |
| AddInputData(int, vtkDataSet *) | ttkAlgorithm | |
| alignForestBinary(const std::shared_ptr< ttk::cta::BinaryTree > &t1, const std::shared_ptr< ttk::cta::BinaryTree > &t2, std::vector< std::vector< float > > &memT, std::vector< std::vector< float > > &memF) | ttk::ContourTreeAlignment | protected |
| alignmentRoot | ttk::ContourTreeAlignment | protected |
| alignmentRootIdx | ttk::ContourTreeAlignment | protected |
| alignmenttreeType | ttk::ContourTreeAlignment | protected |
| alignmentVal | ttk::ContourTreeAlignment | protected |
| alignTree(const std::shared_ptr< ContourTree > &t) | ttk::ContourTreeAlignment | protected |
| alignTree_consistentRoot(const std::shared_ptr< ContourTree > &t) | ttk::ContourTreeAlignment | protected |
| alignTreeBinary(const std::shared_ptr< ttk::cta::BinaryTree > &t1, const std::shared_ptr< ttk::cta::BinaryTree > &t2, std::vector< std::vector< float > > &memT, std::vector< std::vector< float > > &memF) | ttk::ContourTreeAlignment | protected |
| arcMatchMode | ttk::ContourTreeAlignment | protected |
| arcs | ttk::ContourTreeAlignment | protected |
| BaseClass() | ttk::BaseClass | |
| checkEmptyMPIInput(inputType *input) | ttkAlgorithm | inline |
| checkForGlobalAndComputeOrderArray(vtkDataSet *const inputData, vtkDataArray *scalarArray, const int scalarArrayIdx, const bool getGlobalOrder, vtkDataArray *orderArray, ttk::Triangulation *triangulation, const bool enforceOrderArrayIdx) | ttkAlgorithm | |
| checkGlobalIdValidity(ttk::LongSimplexId *globalIds, ttk::SimplexId simplexNumber, unsigned char *ghost, int *rankArray) | ttkAlgorithm | protected |
| CompactTriangulationCacheSize | ttkAlgorithm | protected |
| computeBranches() | ttk::ContourTreeAlignment | protected |
| computeNewAlignmenttree(const std::shared_ptr< ttk::cta::AlignmentTree > &res) | ttk::ContourTreeAlignment | protected |
| ComputeOrderArray(vtkDataSet *const inputData, vtkDataArray *scalarArray, const int scalarArrayIdx, const bool getGlobalOrder, vtkDataArray *oldOrderArray, ttk::Triangulation *triangulation) | ttkAlgorithm | |
| computeRootedDualTree(const std::shared_ptr< ttk::cta::AlignmentEdge > &arc, bool parent1, int &id) | ttk::ContourTreeAlignment | protected |
| computeRootedTree(const std::shared_ptr< ttk::cta::AlignmentNode > &node, const std::shared_ptr< ttk::cta::AlignmentEdge > &parent, int &id) | ttk::ContourTreeAlignment | protected |
| ContourTree typedef | ttk::ContourTreeAlignment | protected |
| ContourTreeAlignment() | ttk::ContourTreeAlignment | inlineprotected |
| contourtrees | ttk::ContourTreeAlignment | protected |
| Debug() | ttk::Debug | |
| debugLevel_ | ttk::Debug | mutableprotected |
| debugMsgNamePrefix_ | ttk::Debug | protected |
| debugMsgPrefix_ | ttk::Debug | protected |
| editCost(const std::shared_ptr< ttk::cta::BinaryTree > &t1, const std::shared_ptr< ttk::cta::BinaryTree > &t2) | ttk::ContourTreeAlignment | protected |
| execute(const std::vector< void * > &scalarsVP, const std::vector< int * > ®ionSizes, const std::vector< int * > &segmentationIds, const std::vector< long long * > &topologies, const std::vector< size_t > &nVertices, const std::vector< size_t > &nEdges, const std::vector< int * > &segmentations, const std::vector< size_t > &segsizes, std::vector< float > &outputVertices, std::vector< long long > &outputFrequencies, std::vector< long long > &outputVertexIds, std::vector< long long > &outputBranchIds, std::vector< long long > &outputSegmentationIds, std::vector< long long > &outputArcIds, std::vector< int > &outputEdges, int seed) | ttk::ContourTreeAlignment | protected |
| FillInputPortInformation(int port, vtkInformation *info) override | ttkContourTreeAlignment | protected |
| ttkAlgorithm::FillInputPortInformation(int ttkNotUsed(port), vtkInformation *ttkNotUsed(info)) override | ttkAlgorithm | inlineprotected |
| FillOutputPortInformation(int port, vtkInformation *info) override | ttkContourTreeAlignment | protected |
| ttkAlgorithm::FillOutputPortInformation(int ttkNotUsed(port), vtkInformation *ttkNotUsed(info)) override | ttkAlgorithm | inlineprotected |
| GenerateGlobalIds(vtkDataSet *input, std::unordered_map< ttk::SimplexId, ttk::SimplexId > &vertGtoL, std::vector< int > &neighborRanks, std::map< int, int > &neighborsToId) | ttkAlgorithm | protected |
| getAlignmentBinary(const std::shared_ptr< ttk::cta::BinaryTree > &t1, const std::shared_ptr< ttk::cta::BinaryTree > &t2) | ttk::ContourTreeAlignment | protected |
| getAlignmentGraph() | ttk::ContourTreeAlignment | protected |
| getAlignmentGraphRooted() | ttk::ContourTreeAlignment | protected |
| getAlignmentRootIdx() | ttk::ContourTreeAlignment | protected |
| GetAlignmenttreeType() | ttkContourTreeAlignment | virtual |
| GetArcMatchMode() | ttkContourTreeAlignment | virtual |
| GetClassName() | ttkContourTreeAlignment | virtual |
| getContourTrees() | ttk::ContourTreeAlignment | protected |
| GetExportJSON() | ttkContourTreeAlignment | virtual |
| GetExportPath() | ttkContourTreeAlignment | virtual |
| getGraphs() | ttk::ContourTreeAlignment | protected |
| GetIdentifierArrayPtr(const bool &enforceArrayIndex, const int &arrayIndex, const std::string &arrayName, vtkDataSet *const inputData, std::vector< ttk::SimplexId > &spareStorage, const int inputPort=0, const bool printErr=true) | ttkAlgorithm | |
| GetMatchTime() | ttkContourTreeAlignment | virtual |
| GetOptionalArray(const bool &enforceArrayIndex, const int &arrayIndex, const std::string &arrayName, vtkDataSet *const inputData, const int &inputPort=0) | ttkAlgorithm | |
| GetOrderArray(vtkDataSet *const inputData, const int scalarArrayIdx, ttk::Triangulation *triangulation, const bool getGlobalOrder=false, const int orderArrayIdx=0, const bool enforceOrderArrayIdx=false) | ttkAlgorithm | |
| GetOrderArrayName(vtkDataArray *const array) | ttkAlgorithm | static |
| GetOutput() | ttkAlgorithm | |
| GetOutput(int) | ttkAlgorithm | |
| GetRandomSeed() | ttkContourTreeAlignment | virtual |
| getThreadNumber() const | ttk::BaseClass | inline |
| GetTriangulation(vtkDataSet *dataSet) | ttkAlgorithm | |
| GetWeightArcMatch() | ttkContourTreeAlignment | virtual |
| GetWeightCombinatorialMatch() | ttkContourTreeAlignment | virtual |
| GetWeightScalarValueMatch() | ttkContourTreeAlignment | virtual |
| initialize(const std::shared_ptr< ContourTree > &t) | ttk::ContourTreeAlignment | protected |
| initialize_consistentRoot(const std::shared_ptr< ContourTree > &t, int rootIdx) | ttk::ContourTreeAlignment | protected |
| IsA(const char *type) | ttkContourTreeAlignment | virtual |
| isBinary(const std::shared_ptr< ttk::cta::Tree > &t) | ttk::ContourTreeAlignment | protected |
| IsTypeOf(const char *type) | ttkContourTreeAlignment | static |
| lastLineMode | ttk::Debug | protectedstatic |
| lastObject_ | ttk::BaseClass | protected |
| MPIGhostPipelinePreconditioning(vtkDataSet *input) | ttkAlgorithm | protected |
| MPIPipelinePreconditioning(vtkDataSet *input, std::vector< int > &neighbors, std::map< int, int > &neighToId, ttk::Triangulation *triangulation=nullptr) | ttkAlgorithm | protected |
| MPITriangulationPreconditioning(ttk::Triangulation *triangulation, vtkDataSet *input) | ttkAlgorithm | protected |
| New() | ttkContourTreeAlignment | static |
| nodes | ttk::ContourTreeAlignment | protected |
| pathToMax(const std::shared_ptr< ttk::cta::AlignmentNode > &root, const std::shared_ptr< ttk::cta::AlignmentNode > &parent) | ttk::ContourTreeAlignment | protected |
| pathToMin(const std::shared_ptr< ttk::cta::AlignmentNode > &root, const std::shared_ptr< ttk::cta::AlignmentNode > &parent) | ttk::ContourTreeAlignment | protected |
| permutation | ttk::ContourTreeAlignment | protected |
| printErr(const std::string &msg, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cerr) const | ttk::Debug | inline |
| printMsg(const std::string &msg, const debug::Priority &priority=debug::Priority::INFO, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const | ttk::Debug | inline |
| printMsg(const std::vector< std::string > &msgs, const debug::Priority &priority=debug::Priority::INFO, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const | ttk::Debug | inline |
| printMsg(const std::string &msg, const double &progress, const double &time, const int &threads, const double &memory, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) const | ttk::Debug | inline |
| printMsg(const std::string &msg, const double &progress, const double &time, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) const | ttk::Debug | inline |
| printMsg(const std::string &msg, const double &progress, const double &time, const int &threads, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) const | ttk::Debug | inline |
| printMsg(const std::string &msg, const double &progress, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) const | ttk::Debug | inline |
| printMsg(const std::string &msg, const double &progress, const debug::Priority &priority, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const | ttk::Debug | inline |
| printMsg(const std::vector< std::vector< std::string > > &rows, const debug::Priority &priority=debug::Priority::INFO, const bool hasHeader=true, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const | ttk::Debug | inline |
| printMsg(const debug::Separator &separator, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::INFO, std::ostream &stream=std::cout) const | ttk::Debug | inline |
| printMsg(const debug::Separator &separator, const debug::Priority &priority, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const | ttk::Debug | inline |
| printMsg(const std::string &msg, const debug::Separator &separator, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::INFO, std::ostream &stream=std::cout) const | ttk::Debug | inline |
| printMsgInternal(const std::string &msg, const std::string &right, const std::string &filler, const debug::Priority &priority=debug::Priority::INFO, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const | ttk::Debug | inlineprotected |
| printMsgInternal(const std::string &msg, const debug::Priority &priority, const debug::LineMode &lineMode, std::ostream &stream=std::cout) const | ttk::Debug | inlineprotected |
| printWrn(const std::string &msg, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cerr) const | ttk::Debug | inline |
| ProcessRequest(vtkInformation *request, vtkInformationVector **inputVectors, vtkInformationVector *outputVector) override | ttkAlgorithm | |
| RequestData(vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector) override | ttkContourTreeAlignment | protected |
| ttkAlgorithm::RequestData(vtkInformation *ttkNotUsed(request), vtkInformationVector **ttkNotUsed(inputVectors), vtkInformationVector *ttkNotUsed(outputVector)) | ttkAlgorithm | inlineprotectedvirtual |
| RequestDataNotGenerated(vtkInformation *ttkNotUsed(request), vtkInformationVector **ttkNotUsed(inputVectors), vtkInformationVector *ttkNotUsed(outputVector)) | ttkAlgorithm | inlineprotectedvirtual |
| RequestDataObject(vtkInformation *request, vtkInformationVector **inputVectors, vtkInformationVector *outputVector) | ttkAlgorithm | protectedvirtual |
| RequestInformation(vtkInformation *ttkNotUsed(request), vtkInformationVector **ttkNotUsed(inputVectors), vtkInformationVector *ttkNotUsed(outputVector)) | ttkAlgorithm | inlineprotectedvirtual |
| RequestUpdateExtent(vtkInformation *ttkNotUsed(request), vtkInformationVector **ttkNotUsed(inputVectors), vtkInformationVector *ttkNotUsed(outputVector)) | ttkAlgorithm | inlineprotectedvirtual |
| RequestUpdateTime(vtkInformation *ttkNotUsed(request), vtkInformationVector **ttkNotUsed(inputVectors), vtkInformationVector *ttkNotUsed(outputVector)) | ttkAlgorithm | inlineprotectedvirtual |
| RequestUpdateTimeDependentInformation(vtkInformation *ttkNotUsed(request), vtkInformationVector **ttkNotUsed(inputVectors), vtkInformationVector *ttkNotUsed(outputVector)) | ttkAlgorithm | inlineprotectedvirtual |
| rootAtNode(const std::shared_ptr< ttk::cta::AlignmentNode > &root) | ttk::ContourTreeAlignment | protected |
| SafeDownCast(vtkObject *o) | ttkContourTreeAlignment | static |
| SAME_DATA_TYPE_AS_INPUT_PORT() | ttkAlgorithm | static |
| SetAlignmenttreeType(int) | ttkContourTreeAlignment | virtual |
| setAlignmenttreeType(int type) | ttk::ContourTreeAlignment | inlineprotected |
| SetArcMatchMode(int) | ttkContourTreeAlignment | virtual |
| setArcMatchMode(int mode) | ttk::ContourTreeAlignment | inlineprotected |
| SetCompactTriangulationCacheSize(float cacheSize) | ttkAlgorithm | inline |
| setDebugLevel(const int &debugLevel) | ttk::Debug | virtual |
| SetDebugLevel(int debugLevel) | ttkAlgorithm | inline |
| setDebugMsgPrefix(const std::string &prefix) | ttk::Debug | inline |
| SetExportJSON(bool) | ttkContourTreeAlignment | virtual |
| SetExportPath(const std::string &) | ttkContourTreeAlignment | virtual |
| SetInputData(vtkDataSet *) | ttkAlgorithm | |
| SetInputData(int, vtkDataSet *) | ttkAlgorithm | |
| SetMatchTime(bool) | ttkContourTreeAlignment | virtual |
| SetRandomSeed(int) | ttkContourTreeAlignment | virtual |
| setThreadNumber(const int threadNumber) | ttk::BaseClass | inlinevirtual |
| SetThreadNumber(int threadNumber) | ttkAlgorithm | inline |
| SetUseAllCores(bool useAllCores) | ttkAlgorithm | inline |
| setWeightArcMatch(float weight) | ttk::ContourTreeAlignment | inlineprotected |
| SetWeightArcMatch(float) | ttkContourTreeAlignment | virtual |
| SetWeightCombinatorialMatch(float) | ttkContourTreeAlignment | virtual |
| setWeightCombinatorialMatch(float weight) | ttk::ContourTreeAlignment | inlineprotected |
| setWeightScalarValueMatch(float weight) | ttk::ContourTreeAlignment | inlineprotected |
| SetWeightScalarValueMatch(float) | ttkContourTreeAlignment | virtual |
| setWrapper(const Wrapper *wrapper) override | ttk::Debug | virtual |
| Superclass typedef | ttkContourTreeAlignment | |
| threadNumber_ | ttk::BaseClass | mutableprotected |
| traceAlignmentForest(const std::shared_ptr< ttk::cta::BinaryTree > &t1, const std::shared_ptr< ttk::cta::BinaryTree > &t2, std::vector< std::vector< float > > &memT, std::vector< std::vector< float > > &memF) | ttk::ContourTreeAlignment | protected |
| traceAlignmentTree(const std::shared_ptr< ttk::cta::BinaryTree > &t1, const std::shared_ptr< ttk::cta::BinaryTree > &t2, std::vector< std::vector< float > > &memT, std::vector< std::vector< float > > &memF) | ttk::ContourTreeAlignment | protected |
| traceNullAlignment(const std::shared_ptr< ttk::cta::BinaryTree > &t, bool first) | ttk::ContourTreeAlignment | protected |
| ttkAlgorithm() | ttkAlgorithm | protected |
| ttkContourTreeAlignment() | ttkContourTreeAlignment | protected |
| UpdateThreadNumber() | ttkAlgorithm | inline |
| weightArcMatch | ttk::ContourTreeAlignment | protected |
| weightCombinatorialMatch | ttk::ContourTreeAlignment | protected |
| weightScalarValueMatch | ttk::ContourTreeAlignment | protected |
| welcomeMsg(std::ostream &stream) | ttk::Debug | protected |
| wrapper_ | ttk::BaseClass | protected |
| ~BaseClass()=default | ttk::BaseClass | virtual |
| ~ContourTreeAlignment() override | ttk::ContourTreeAlignment | inlineprotected |
| ~Debug() override | ttk::Debug | |
| ~ttkAlgorithm() override | ttkAlgorithm | protected |
| ~ttkContourTreeAlignment() override=default | ttkContourTreeAlignment | protected |
1.9.8