TTK VTK-filter that wraps the ttk::DistanceMatrixDistorsion module. More...

#include <ttkDistanceMatrixDistorsion.h>

Inheritance diagram for ttkDistanceMatrixDistorsion:

Public Types
typedef ttkAlgorithm	Superclass

Public Types inherited from ttkAlgorithm
typedef vtkAlgorithm	Superclass

Public Member Functions
virtual void	SetSelectFieldsWithRegexpHigh (bool)

virtual bool	GetSelectFieldsWithRegexpHigh ()

virtual void	SetSelectFieldsWithRegexpLow (bool)

virtual bool	GetSelectFieldsWithRegexpLow ()

virtual void	SetRegexpStringHigh (const std::string &)

virtual std::string	GetRegexpStringHigh ()

virtual void	SetRegexpStringLow (const std::string &)

virtual std::string	GetRegexpStringLow ()

void	ClearScalarFieldsHigh ()

void	ClearScalarFieldsLow ()

virtual const char *	GetClassName ()

virtual int	IsA (const char *type)

void	SetScalarFieldsHigh (const std::string &s)

void	SetScalarFieldsLow (const std::string &s)

Public Member Functions inherited from ttkAlgorithm
virtual const char *	GetClassName ()

virtual int	IsA (const char *type)

void	UpdateThreadNumber ()

void	SetThreadNumber (int threadNumber)

void	SetUseAllCores (bool useAllCores)

void	SetDebugLevel (int debugLevel)

void	SetCompactTriangulationCacheSize (float cacheSize)

vtkDataArray *	GetOptionalArray (const bool &enforceArrayIndex, const int &arrayIndex, const std::string &arrayName, vtkDataSet *const inputData, const int &inputPort=0)

vtkDataArray *	GetOrderArray (vtkDataSet *const inputData, const int scalarArrayIdx, const int orderArrayIdx=0, const bool enforceOrderArrayIdx=false)

ttk::SimplexId *	GetIdentifierArrayPtr (const bool &enforceArrayIndex, const int &arrayIndex, const std::string &arrayName, vtkDataSet *const inputData, std::vector< ttk::SimplexId > &spareStorage, const int inputPort=0, const bool printErr=true)

ttk::Triangulation *	GetTriangulation (vtkDataSet *dataSet)

int	ProcessRequest (vtkInformation request, vtkInformationVector inputVectors, vtkInformationVector outputVector) override

vtkDataSet *	GetOutput ()

vtkDataSet *	GetOutput (int)

void	SetInputData (vtkDataSet *)

void	SetInputData (int, vtkDataSet *)

void	AddInputData (vtkDataSet *)

void	AddInputData (int, vtkDataSet *)

template<typename inputType >
int	checkEmptyMPIInput (inputType *input)
	This method tests whether the input is a nullptr. If the computation is being done on multiple processes, it is possible that the domain of one process or more is empty, but not others, therefore in that particular case the rest of the filter will not be computed but an error message will not be sent.

Public Member Functions inherited from ttk::Debug
	Debug ()

	~Debug () override

virtual int	setDebugLevel (const int &debugLevel)

int	setWrapper (const Wrapper *wrapper) override

int	printMsg (const std::string &msg, const debug::Priority &priority=debug::Priority::INFO, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const

int	printMsg (const std::vector< std::string > &msgs, const debug::Priority &priority=debug::Priority::INFO, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const

int	printErr (const std::string &msg, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cerr) const

int	printWrn (const std::string &msg, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cerr) const

int	printMsg (const std::string &msg, const double &progress, const double &time, const int &threads, const double &memory, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) const

int	printMsg (const std::string &msg, const double &progress, const double &time, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) const

int	printMsg (const std::string &msg, const double &progress, const double &time, const int &threads, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) const

int	printMsg (const std::string &msg, const double &progress, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) const

int	printMsg (const std::string &msg, const double &progress, const debug::Priority &priority, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const

int	printMsg (const std::vector< std::vector< std::string > > &rows, const debug::Priority &priority=debug::Priority::INFO, const bool hasHeader=true, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const

int	printMsg (const debug::Separator &separator, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::INFO, std::ostream &stream=std::cout) const

int	printMsg (const debug::Separator &separator, const debug::Priority &priority, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const

int	printMsg (const std::string &msg, const debug::Separator &separator, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::INFO, std::ostream &stream=std::cout) const

void	setDebugMsgPrefix (const std::string &prefix)

Public Member Functions inherited from ttk::BaseClass
	BaseClass ()

virtual	~BaseClass ()=default

int	getThreadNumber () const

virtual int	setThreadNumber (const int threadNumber)

virtual int	setWrapper (const Wrapper *wrapper)

Static Public Member Functions
static ttkDistanceMatrixDistorsion *	New ()

static int	IsTypeOf (const char *type)

static ttkDistanceMatrixDistorsion *	SafeDownCast (vtkObject *o)

Static Public Member Functions inherited from ttkAlgorithm
static ttkAlgorithm *	New ()

static int	IsTypeOf (const char *type)

static ttkAlgorithm *	SafeDownCast (vtkObject *o)

static std::string	GetOrderArrayName (vtkDataArray *const array)

static vtkInformationIntegerKey *	SAME_DATA_TYPE_AS_INPUT_PORT ()

Protected Member Functions
	ttkDistanceMatrixDistorsion ()

	~ttkDistanceMatrixDistorsion () override=default

int	FillInputPortInformation (int port, vtkInformation *info) override

int	FillOutputPortInformation (int port, vtkInformation *info) override

int	RequestData (vtkInformation request, vtkInformationVector inputVector, vtkInformationVector outputVector) override

Protected Member Functions inherited from ttkAlgorithm
	ttkAlgorithm ()

	~ttkAlgorithm () override

void	MPIGhostPipelinePreconditioning (vtkDataSet *input)

void	MPIPipelinePreconditioning (vtkDataSet input, std::vector< int > &neighbors, ttk::Triangulation triangulation=nullptr)

bool	checkGlobalIdValidity (ttk::LongSimplexId globalIds, ttk::SimplexId simplexNumber, unsigned char ghost, int *rankArray)

int	GenerateGlobalIds (vtkDataSet *input, std::unordered_map< ttk::SimplexId, ttk::SimplexId > &vertGtoL, std::vector< int > &neighborRanks)

void	MPITriangulationPreconditioning (ttk::Triangulation triangulation, vtkDataSet input)

virtual int	RequestDataObject (vtkInformation request, vtkInformationVector inputVectors, vtkInformationVector outputVector)

virtual int	RequestInformation (vtkInformation ttkNotUsed(request), vtkInformationVector ttkNotUsed(inputVectors), vtkInformationVector ttkNotUsed(outputVector))

virtual int	RequestUpdateTime (vtkInformation ttkNotUsed(request), vtkInformationVector ttkNotUsed(inputVectors), vtkInformationVector ttkNotUsed(outputVector))

virtual int	RequestUpdateTimeDependentInformation (vtkInformation ttkNotUsed(request), vtkInformationVector ttkNotUsed(inputVectors), vtkInformationVector ttkNotUsed(outputVector))

virtual int	RequestUpdateExtent (vtkInformation ttkNotUsed(request), vtkInformationVector ttkNotUsed(inputVectors), vtkInformationVector ttkNotUsed(outputVector))

virtual int	RequestDataNotGenerated (vtkInformation ttkNotUsed(request), vtkInformationVector ttkNotUsed(inputVectors), vtkInformationVector ttkNotUsed(outputVector))

virtual int	RequestData (vtkInformation ttkNotUsed(request), vtkInformationVector ttkNotUsed(inputVectors), vtkInformationVector ttkNotUsed(outputVector))

int	FillInputPortInformation (int ttkNotUsed(port), vtkInformation *ttkNotUsed(info)) override

int	FillOutputPortInformation (int ttkNotUsed(port), vtkInformation *ttkNotUsed(info)) override

Protected Member Functions inherited from ttk::Debug
int	printMsgInternal (const std::string &msg, const std::string &right, const std::string &filler, const debug::Priority &priority=debug::Priority::INFO, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const

int	printMsgInternal (const std::string &msg, const debug::Priority &priority, const debug::LineMode &lineMode, std::ostream &stream=std::cout) const

int	welcomeMsg (std::ostream &stream)

Protected Member Functions inherited from ttk::DistanceMatrixDistorsion
	DistanceMatrixDistorsion ()

int	execute (const std::vector< double * > &highDistMatrix, const std::vector< double * > &lowDistMatrix, double &distorsionValue, double *distorsionVerticesValues) const

Additional Inherited Members
Protected Attributes inherited from ttkAlgorithm
float	CompactTriangulationCacheSize {0.2f}

Protected Attributes inherited from ttk::Debug
int	debugLevel_

std::string	debugMsgPrefix_

std::string	debugMsgNamePrefix_

Protected Attributes inherited from ttk::BaseClass
bool	lastObject_

int	threadNumber_

Wrapper *	wrapper_

Static Protected Attributes inherited from ttk::Debug
static COMMON_EXPORTS debug::LineMode	lastLineMode = ttk::debug::LineMode::NEW

Detailed Description

TTK VTK-filter that wraps the ttk::DistanceMatrixDistorsion module.

Author: Alexandre Talon alexa.nosp@m.ndre.nosp@m..talo.nosp@m.n@li.nosp@m.p6.fr

Date: January 2022.

This VTK filter uses the ttk::DistanceMatrixDistorsion module to compute the distorsion between two distance matrices representing the same points (for instance in low and high dimensions), according to the SIM formula.

Parameters

Input0	vtkTable.
Input1	vtkTable.
Output	vtkTable.

This filter can be used as any other VTK filter (for instance, by using the sequence of calls SetInputData(), Update(), GetOutputDataObject()).

The input data array needs to be specified via the standard VTK call vtkAlgorithm::SetInputArrayToProcess() with the following parameters:

Parameters

idx	0 (FIXED: the first array the algorithm requires)
port	0 (FIXED: first port)
connection	0 (FIXED: first connection)
fieldAssociation	0 (FIXED: point data)
arrayName	(DYNAMIC: string identifier of the input array)

See the related ParaView example state files for usage examples within a VTK pipeline.

See also: ttk::DistanceMatrixDistorsion; ttkAlgorithm

Definition at line 44 of file ttkDistanceMatrixDistorsion.h.

Member Typedef Documentation

◆ Superclass

typedef ttkAlgorithm ttkDistanceMatrixDistorsion::Superclass

Definition at line 81 of file ttkDistanceMatrixDistorsion.h.

Constructor & Destructor Documentation

◆ ttkDistanceMatrixDistorsion()

ttkDistanceMatrixDistorsion::ttkDistanceMatrixDistorsion ( )

protected

Definition at line 23 of file ttkDistanceMatrixDistorsion.cpp.

◆ ~ttkDistanceMatrixDistorsion()

ttkDistanceMatrixDistorsion::~ttkDistanceMatrixDistorsion ( )

overrideprotecteddefault

Member Function Documentation

◆ ClearScalarFieldsHigh()

void ttkDistanceMatrixDistorsion::ClearScalarFieldsHigh ( )

inline

Definition at line 71 of file ttkDistanceMatrixDistorsion.h.

◆ ClearScalarFieldsLow()

void ttkDistanceMatrixDistorsion::ClearScalarFieldsLow ( )

inline

Definition at line 75 of file ttkDistanceMatrixDistorsion.h.

◆ FillInputPortInformation()

int ttkDistanceMatrixDistorsion::FillInputPortInformation	(	int	port,
		vtkInformation *	info
	)

overrideprotected

Definition at line 28 of file ttkDistanceMatrixDistorsion.cpp.

◆ FillOutputPortInformation()

int ttkDistanceMatrixDistorsion::FillOutputPortInformation	(	int	port,
		vtkInformation *	info
	)

overrideprotected

Definition at line 40 of file ttkDistanceMatrixDistorsion.cpp.

◆ GetClassName()

virtual const char * ttkDistanceMatrixDistorsion::GetClassName ( )

virtual

Reimplemented from ttkAlgorithm.

◆ GetRegexpStringHigh()

virtual std::string ttkDistanceMatrixDistorsion::GetRegexpStringHigh ( )

virtual

◆ GetRegexpStringLow()

virtual std::string ttkDistanceMatrixDistorsion::GetRegexpStringLow ( )

virtual

◆ GetSelectFieldsWithRegexpHigh()

virtual bool ttkDistanceMatrixDistorsion::GetSelectFieldsWithRegexpHigh ( )

virtual

◆ GetSelectFieldsWithRegexpLow()

virtual bool ttkDistanceMatrixDistorsion::GetSelectFieldsWithRegexpLow ( )

virtual

◆ IsA()

virtual int ttkDistanceMatrixDistorsion::IsA ( const char * type )

virtual

Reimplemented from ttkAlgorithm.

◆ IsTypeOf()

static int ttkDistanceMatrixDistorsion::IsTypeOf ( const char * type )

static

◆ New()

static ttkDistanceMatrixDistorsion * ttkDistanceMatrixDistorsion::New ( )

static

◆ RequestData()

int ttkDistanceMatrixDistorsion::RequestData	(	vtkInformation *	request,
		vtkInformationVector **	inputVector,
		vtkInformationVector *	outputVector
	)

overrideprotected

Definition at line 63 of file ttkDistanceMatrixDistorsion.cpp.

◆ SafeDownCast()

static ttkDistanceMatrixDistorsion * ttkDistanceMatrixDistorsion::SafeDownCast ( vtkObject * o )

static

◆ SetRegexpStringHigh()

virtual void ttkDistanceMatrixDistorsion::SetRegexpStringHigh ( const std::string & )

virtual

◆ SetRegexpStringLow()

virtual void ttkDistanceMatrixDistorsion::SetRegexpStringLow ( const std::string & )

virtual

◆ SetScalarFieldsHigh()

void ttkDistanceMatrixDistorsion::SetScalarFieldsHigh ( const std::string & s )

inline

Definition at line 84 of file ttkDistanceMatrixDistorsion.h.

◆ SetScalarFieldsLow()

void ttkDistanceMatrixDistorsion::SetScalarFieldsLow ( const std::string & s )

inline

Definition at line 88 of file ttkDistanceMatrixDistorsion.h.

◆ SetSelectFieldsWithRegexpHigh()

virtual void ttkDistanceMatrixDistorsion::SetSelectFieldsWithRegexpHigh ( bool )

virtual

◆ SetSelectFieldsWithRegexpLow()

virtual void ttkDistanceMatrixDistorsion::SetSelectFieldsWithRegexpLow ( bool )

virtual

The documentation for this class was generated from the following files:

/home/julien/Pro/git/github/ttk-tierny/core/vtk/ttkDistanceMatrixDistorsion/ttkDistanceMatrixDistorsion.h
/home/julien/Pro/git/github/ttk-tierny/core/vtk/ttkDistanceMatrixDistorsion/ttkDistanceMatrixDistorsion.cpp

Public Types

Public Member Functions

Static Public Member Functions

Protected Member Functions

Additional Inherited Members

Detailed Description

Member Typedef Documentation

◆ Superclass

Constructor & Destructor Documentation

◆ ttkDistanceMatrixDistorsion()

◆ ~ttkDistanceMatrixDistorsion()

Member Function Documentation

◆ ClearScalarFieldsHigh()

◆ ClearScalarFieldsLow()

◆ FillInputPortInformation()

◆ FillOutputPortInformation()

◆ GetClassName()

◆ GetRegexpStringHigh()

◆ GetRegexpStringLow()

◆ GetSelectFieldsWithRegexpHigh()

◆ GetSelectFieldsWithRegexpLow()

◆ IsA()

◆ IsTypeOf()

◆ New()

◆ RequestData()

◆ SafeDownCast()

◆ SetRegexpStringHigh()

◆ SetRegexpStringLow()

◆ SetScalarFieldsHigh()

◆ SetScalarFieldsLow()

◆ SetSelectFieldsWithRegexpHigh()

◆ SetSelectFieldsWithRegexpLow()