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ttkTopologicalSimplificationByPersistence Member List

This is the complete list of members for ttkTopologicalSimplificationByPersistence, including all inherited members.

AddInputData(vtkDataSet *)ttkAlgorithm
AddInputData(int, vtkDataSet *)ttkAlgorithm
allocateMemory(std::vector< IT > &segmentation, std::vector< IT > &queueMask, std::vector< IT > &localOrder, std::vector< Propagation< IT > * > &propagationMask, std::vector< std::tuple< IT, IT, IT > > &sortedIndices, const IT &nVertices) constttk::lts::LocalizedTopologicalSimplificationinlineprotected
BaseClass()ttk::BaseClass
checkEmptyMPIInput(inputType *input)ttkAlgorithminline
checkGlobalIdValidity(ttk::LongSimplexId *globalIds, ttk::SimplexId simplexNumber, unsigned char *ghost, int *rankArray)ttkAlgorithmprotected
CompactTriangulationCacheSizettkAlgorithmprotected
computeGlobalOrder(IT *order, const IT *localOrder, std::vector< std::tuple< IT, IT, IT > > &sortedIndices) constttk::lts::LocalizedTopologicalSimplificationinlineprotected
computeLocalOrderOfSegment(IT *localOrder, const Propagation< IT > *propagation, const TT *triangulation, const IT *segmentation, const IT *inputOrder) constttk::lts::LocalizedTopologicalSimplificationinlineprotected
computeLocalOrderOfSegmentIteration(IT *localOrder, IT *localVertexSequence, const bool &performSuperlevelSetPropagation, const TT *triangulation, const IT *segmentation, const IT &segmentId, const std::vector< IT > &boundary, const std::vector< IT > &segment, const IT &saddleIdx) constttk::lts::LocalizedTopologicalSimplificationinlineprotected
computeLocalOrderOfSegments(IT *localOrder, const TT *triangulation, const IT *segmentation, const IT *inputOrder, const std::vector< Propagation< IT > * > &propagations) constttk::lts::LocalizedTopologicalSimplificationinlineprotected
computeNumericalPerturbation(DT *scalars, const std::vector< std::tuple< IT, IT, IT > > &sortedIndices, const bool descending=false) constttk::lts::LocalizedTopologicalSimplificationinlineprotected
computePersistenceSensitivePropagation(Propagation< IT > &propagation, Propagation< IT > **propagationMask, IT *segmentation, IT *queueMask, const TT *triangulation, const IT *order, const DT *scalars, const DT persistenceThreshold) constttk::lts::LocalizedTopologicalSimplificationinlineprotected
computePersistenceSensitivePropagations(std::vector< Propagation< IT > > &propagations, Propagation< IT > **propagationMask, IT *segmentation, IT *queueMask, const TT *triangulation, const IT *order, const DT *scalars, const DT persistenceThreshold) constttk::lts::LocalizedTopologicalSimplificationinlineprotected
computeSegment(IT *segmentation, Propagation< IT > *propagation, const IT *order, const TT *triangulation) constttk::lts::LocalizedTopologicalSimplificationinlineprotected
computeSegments(IT *segmentation, std::vector< Propagation< IT > * > &propagations, const IT *order, const TT *triangulation) constttk::lts::LocalizedTopologicalSimplificationinlineprotected
computeSimplePropagation(Propagation< IT > &propagation, Propagation< IT > **propagationMask, IT *segmentation, IT *queueMask, const TT *triangulation, const IT *order) constttk::lts::LocalizedTopologicalSimplificationinlineprotected
computeSimplePropagations(std::vector< Propagation< IT > > &propagations, Propagation< IT > **propagationMask, IT *segmentation, IT *queueMask, const TT *triangulation, const IT *inputOrder) constttk::lts::LocalizedTopologicalSimplificationinlineprotected
Debug()ttk::Debug
debugLevel_ttk::Debugmutableprotected
debugMsgNamePrefix_ttk::Debugprotected
debugMsgPrefix_ttk::Debugprotected
detectAndRemoveNonPersistentMaxima(DT *scalars, IT *order, IT *segmentation, IT *queueMask, IT *localOrder, Propagation< IT > **propagationMask, std::vector< Propagation< IT > > &propagations, std::vector< std::tuple< IT, IT, IT > > &sortedIndices, const TT *triangulation, const DT persistenceThreshold) constttk::lts::LocalizedTopologicalSimplificationinlineprotected
detectAndRemoveUnauthorizedMaxima(IT *order, IT *segmentation, IT *queueMask, IT *localOrder, Propagation< IT > **propagationMask, std::vector< Propagation< IT > > &propagations, std::vector< std::tuple< IT, IT, IT > > &sortedIndices, const TT *triangulation, const IT *authorizedExtremaIndices, const IT &nAuthorizedExtremaIndices) constttk::lts::LocalizedTopologicalSimplificationinlineprotected
FillInputPortInformation(int port, vtkInformation *info) overridettkTopologicalSimplificationByPersistenceprotected
ttkAlgorithm::FillInputPortInformation(int ttkNotUsed(port), vtkInformation *ttkNotUsed(info)) overridettkAlgorithminlineprotected
FillOutputPortInformation(int port, vtkInformation *info) overridettkTopologicalSimplificationByPersistenceprotected
ttkAlgorithm::FillOutputPortInformation(int ttkNotUsed(port), vtkInformation *ttkNotUsed(info)) overridettkAlgorithminlineprotected
finalizePropagations(std::vector< Propagation< IT > * > &parentPropagations, std::vector< Propagation< IT > > &propagations, const IT nVertices) constttk::lts::LocalizedTopologicalSimplificationinlineprotected
flattenOrder(IT *outputOrder, const std::vector< Propagation< IT > * > &parentPropagations) constttk::lts::LocalizedTopologicalSimplificationinlineprotected
flattenScalars(DT *scalars, const std::vector< Propagation< IT > > &propagationsA, const std::vector< Propagation< IT > > &propagationsB={}) constttk::lts::LocalizedTopologicalSimplificationinlineprotected
GenerateGlobalIds(vtkDataSet *input, std::unordered_map< ttk::SimplexId, ttk::SimplexId > &vertGtoL, std::vector< int > &neighborRanks)ttkAlgorithmprotected
GetClassName()ttkTopologicalSimplificationByPersistencevirtual
GetComputePerturbation()ttkTopologicalSimplificationByPersistencevirtual
GetIdentifierArrayPtr(const bool &enforceArrayIndex, const int &arrayIndex, const std::string &arrayName, vtkDataSet *const inputData, std::vector< ttk::SimplexId > &spareStorage, const int inputPort=0, const bool printErr=true)ttkAlgorithm
GetOptionalArray(const bool &enforceArrayIndex, const int &arrayIndex, const std::string &arrayName, vtkDataSet *const inputData, const int &inputPort=0)ttkAlgorithm
GetOrderArray(vtkDataSet *const inputData, const int scalarArrayIdx, const int orderArrayIdx=0, const bool enforceOrderArrayIdx=false)ttkAlgorithm
GetOrderArrayName(vtkDataArray *const array)ttkAlgorithmstatic
GetOutput()ttkAlgorithm
GetOutput(int)ttkAlgorithm
GetPairType() constttkTopologicalSimplificationByPersistencevirtual
GetPersistenceThreshold()ttkTopologicalSimplificationByPersistencevirtual
getThreadNumber() constttk::BaseClassinline
GetThresholdIsAbsolute()ttkTopologicalSimplificationByPersistencevirtual
GetTriangulation(vtkDataSet *dataSet)ttkAlgorithm
initializeMemory(IT *segmentation, IT *queueMask, IT *localOrder, Propagation< IT > **propagationMask, const IT &nVertices) constttk::lts::LocalizedTopologicalSimplificationinlineprotected
initializePropagations(std::vector< Propagation< IT > > &propagations, IT *authorizationMask, IT *maximaBuffer, const IT *authorizedExtremaIndices, const IT &nAuthorizedExtremaIndices, const IT *order, const TT *triangulation) constttk::lts::LocalizedTopologicalSimplificationinlineprotected
invertOrder(IT *outputOrder, const IT &nVertices) constttk::lts::LocalizedTopologicalSimplificationinlineprotected
IsA(const char *type)ttkTopologicalSimplificationByPersistencevirtual
IsTypeOf(const char *type)ttkTopologicalSimplificationByPersistencestatic
lastLineModettk::Debugprotectedstatic
lastObject_ttk::BaseClassprotected
LocalizedTopologicalSimplification()ttk::lts::LocalizedTopologicalSimplificationinlineprotected
MPIGhostPipelinePreconditioning(vtkDataSet *input)ttkAlgorithmprotected
MPIPipelinePreconditioning(vtkDataSet *input, std::vector< int > &neighbors, ttk::Triangulation *triangulation=nullptr)ttkAlgorithmprotected
MPITriangulationPreconditioning(ttk::Triangulation *triangulation, vtkDataSet *input)ttkAlgorithmprotected
New()ttkTopologicalSimplificationByPersistencestatic
PAIR_TYPE enum namettk::lts::LocalizedTopologicalSimplificationprotected
preconditionTriangulation(ttk::AbstractTriangulation *triangulation) constttk::lts::LocalizedTopologicalSimplificationinlineprotected
printErr(const std::string &msg, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cerr) constttk::Debuginline
printMsg(const std::string &msg, const debug::Priority &priority=debug::Priority::INFO, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) constttk::Debuginline
printMsg(const std::vector< std::string > &msgs, const debug::Priority &priority=debug::Priority::INFO, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) constttk::Debuginline
printMsg(const std::string &msg, const double &progress, const double &time, const int &threads, const double &memory, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) constttk::Debuginline
printMsg(const std::string &msg, const double &progress, const double &time, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) constttk::Debuginline
printMsg(const std::string &msg, const double &progress, const double &time, const int &threads, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) constttk::Debuginline
printMsg(const std::string &msg, const double &progress, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) constttk::Debuginline
printMsg(const std::string &msg, const double &progress, const debug::Priority &priority, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) constttk::Debuginline
printMsg(const std::vector< std::vector< std::string > > &rows, const debug::Priority &priority=debug::Priority::INFO, const bool hasHeader=true, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) constttk::Debuginline
printMsg(const debug::Separator &separator, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::INFO, std::ostream &stream=std::cout) constttk::Debuginline
printMsg(const debug::Separator &separator, const debug::Priority &priority, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) constttk::Debuginline
printMsg(const std::string &msg, const debug::Separator &separator, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::INFO, std::ostream &stream=std::cout) constttk::Debuginline
printMsgInternal(const std::string &msg, const std::string &right, const std::string &filler, const debug::Priority &priority=debug::Priority::INFO, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) constttk::Debuginlineprotected
printMsgInternal(const std::string &msg, const debug::Priority &priority, const debug::LineMode &lineMode, std::ostream &stream=std::cout) constttk::Debuginlineprotected
printWrn(const std::string &msg, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cerr) constttk::Debuginline
ProcessRequest(vtkInformation *request, vtkInformationVector **inputVectors, vtkInformationVector *outputVector) overridettkAlgorithm
removeNonPersistentExtrema(DT *scalars, IT *order, const TT *triangulation, const DT persistenceThreshold, const bool &computePerturbation, const PAIR_TYPE &pairType=PAIR_TYPE::EXTREMUM_SADDLE) constttk::lts::LocalizedTopologicalSimplificationinlineprotected
removeUnauthorizedExtrema(DT *scalars, IT *order, const TT *triangulation, const IT *authorizedExtremaIndices, const IT &nAuthorizedExtremaIndices, const bool &computePerturbation) constttk::lts::LocalizedTopologicalSimplificationinlineprotected
RequestData(vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector) overridettkTopologicalSimplificationByPersistenceprotected
ttkAlgorithm::RequestData(vtkInformation *ttkNotUsed(request), vtkInformationVector **ttkNotUsed(inputVectors), vtkInformationVector *ttkNotUsed(outputVector))ttkAlgorithminlineprotectedvirtual
RequestDataNotGenerated(vtkInformation *ttkNotUsed(request), vtkInformationVector **ttkNotUsed(inputVectors), vtkInformationVector *ttkNotUsed(outputVector))ttkAlgorithminlineprotectedvirtual
RequestDataObject(vtkInformation *request, vtkInformationVector **inputVectors, vtkInformationVector *outputVector)ttkAlgorithmprotectedvirtual
RequestInformation(vtkInformation *ttkNotUsed(request), vtkInformationVector **ttkNotUsed(inputVectors), vtkInformationVector *ttkNotUsed(outputVector))ttkAlgorithminlineprotectedvirtual
RequestUpdateExtent(vtkInformation *ttkNotUsed(request), vtkInformationVector **ttkNotUsed(inputVectors), vtkInformationVector *ttkNotUsed(outputVector))ttkAlgorithminlineprotectedvirtual
RequestUpdateTime(vtkInformation *ttkNotUsed(request), vtkInformationVector **ttkNotUsed(inputVectors), vtkInformationVector *ttkNotUsed(outputVector))ttkAlgorithminlineprotectedvirtual
RequestUpdateTimeDependentInformation(vtkInformation *ttkNotUsed(request), vtkInformationVector **ttkNotUsed(inputVectors), vtkInformationVector *ttkNotUsed(outputVector))ttkAlgorithminlineprotectedvirtual
SafeDownCast(vtkObject *o)ttkTopologicalSimplificationByPersistencestatic
SAME_DATA_TYPE_AS_INPUT_PORT()ttkAlgorithmstatic
SetCompactTriangulationCacheSize(float cacheSize)ttkAlgorithminline
SetComputePerturbation(bool)ttkTopologicalSimplificationByPersistencevirtual
setDebugLevel(const int &debugLevel)ttk::Debugvirtual
SetDebugLevel(int debugLevel)ttkAlgorithminline
setDebugMsgPrefix(const std::string &prefix)ttk::Debuginline
SetInputData(vtkDataSet *)ttkAlgorithm
SetInputData(int, vtkDataSet *)ttkAlgorithm
SetPairType(int _arg)ttkTopologicalSimplificationByPersistencevirtual
SetPairType(PAIR_TYPE)ttkTopologicalSimplificationByPersistencevirtual
SetPersistenceThreshold(double)ttkTopologicalSimplificationByPersistencevirtual
setThreadNumber(const int threadNumber)ttk::BaseClassinlinevirtual
SetThreadNumber(int threadNumber)ttkAlgorithminline
SetThresholdIsAbsolute(bool)ttkTopologicalSimplificationByPersistencevirtual
SetUseAllCores(bool useAllCores)ttkAlgorithminline
setWrapper(const Wrapper *wrapper) overridettk::Debugvirtual
Superclass typedefttkTopologicalSimplificationByPersistence
threadNumber_ttk::BaseClassmutableprotected
ttkAlgorithm()ttkAlgorithmprotected
ttkTopologicalSimplificationByPersistence()ttkTopologicalSimplificationByPersistenceprotected
UpdateThreadNumber()ttkAlgorithminline
welcomeMsg(std::ostream &stream)ttk::Debugprotected
wrapper_ttk::BaseClassprotected
~BaseClass()=defaultttk::BaseClassvirtual
~Debug() overridettk::Debug
~LocalizedTopologicalSimplification() override=defaultttk::lts::LocalizedTopologicalSimplificationprotected
~ttkAlgorithm() overridettkAlgorithmprotected
~ttkTopologicalSimplificationByPersistence() overridettkTopologicalSimplificationByPersistenceprotected