TTK
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ttkTrackingFromPersistenceDiagrams Member List

This is the complete list of members for ttkTrackingFromPersistenceDiagrams, including all inherited members.

AddInputData(vtkDataSet *)ttkAlgorithm
AddInputData(int, vtkDataSet *)ttkAlgorithm
BaseClass()ttk::BaseClass
buildMesh(const std::vector< ttk::trackingTuple > &trackings, const std::vector< std::vector< ttk::MatchingType > > &outputMatchings, const std::vector< ttk::DiagramType > &inputPersistenceDiagrams, const bool useGeometricSpacing, const double spacing, const bool doPostProc, const std::vector< std::set< int > > &trackingTupleToMerged, vtkPoints *points, vtkUnstructuredGrid *persistenceDiagram, vtkDoubleArray *persistenceScalars, vtkDoubleArray *valueScalars, vtkIntArray *matchingIdScalars, vtkIntArray *lengthScalars, vtkIntArray *timeScalars, vtkIntArray *componentIds, vtkIntArray *pointTypeScalars, const ttk::Debug &dbg)ttkTrackingFromPersistenceDiagramsstatic
checkEmptyMPIInput(inputType *input)ttkAlgorithminline
checkForGlobalAndComputeOrderArray(vtkDataSet *const inputData, vtkDataArray *scalarArray, const int scalarArrayIdx, const bool getGlobalOrder, vtkDataArray *orderArray, ttk::Triangulation *triangulation, const bool enforceOrderArrayIdx)ttkAlgorithm
checkGlobalIdValidity(ttk::LongSimplexId *globalIds, ttk::SimplexId simplexNumber, unsigned char *ghost, int *rankArray)ttkAlgorithmprotected
CompactTriangulationCacheSizettkAlgorithmprotected
ComputeOrderArray(vtkDataSet *const inputData, vtkDataArray *scalarArray, const int scalarArrayIdx, const bool getGlobalOrder, vtkDataArray *oldOrderArray, ttk::Triangulation *triangulation)ttkAlgorithm
Debug()ttk::Debug
debugLevel_ttk::Debugmutableprotected
debugMsgNamePrefix_ttk::Debugprotected
debugMsgPrefix_ttk::Debugprotected
execute()ttk::TrackingFromPersistenceDiagramsprotected
FillInputPortInformation(int port, vtkInformation *info) overridettkTrackingFromPersistenceDiagramsprotected
ttkAlgorithm::FillInputPortInformation(int ttkNotUsed(port), vtkInformation *ttkNotUsed(info)) overridettkAlgorithminlineprotected
FillOutputPortInformation(int port, vtkInformation *info) overridettkTrackingFromPersistenceDiagramsprotected
ttkAlgorithm::FillOutputPortInformation(int ttkNotUsed(port), vtkInformation *ttkNotUsed(info)) overridettkAlgorithminlineprotected
GenerateGlobalIds(vtkDataSet *input, std::unordered_map< ttk::SimplexId, ttk::SimplexId > &vertGtoL, std::vector< int > &neighborRanks, std::map< int, int > &neighborsToId)ttkAlgorithmprotected
GetClassName()ttkTrackingFromPersistenceDiagramsvirtual
GetDistanceAlgorithm()ttkTrackingFromPersistenceDiagramsvirtual
GetDoPostProc()ttkTrackingFromPersistenceDiagramsvirtual
GetIdentifierArrayPtr(const bool &enforceArrayIndex, const int &arrayIndex, const std::string &arrayName, vtkDataSet *const inputData, std::vector< ttk::SimplexId > &spareStorage, const int inputPort=0, const bool printErr=true)ttkAlgorithm
GetOptionalArray(const bool &enforceArrayIndex, const int &arrayIndex, const std::string &arrayName, vtkDataSet *const inputData, const int &inputPort=0)ttkAlgorithm
GetOrderArray(vtkDataSet *const inputData, const int scalarArrayIdx, ttk::Triangulation *triangulation, const bool getGlobalOrder=false, const int orderArrayIdx=0, const bool enforceOrderArrayIdx=false)ttkAlgorithm
GetOrderArrayName(vtkDataArray *const array)ttkAlgorithmstatic
GetOutput()ttkAlgorithm
GetOutput(int)ttkAlgorithm
GetPE()ttkTrackingFromPersistenceDiagramsvirtual
GetPostProcThresh()ttkTrackingFromPersistenceDiagramsvirtual
GetPS()ttkTrackingFromPersistenceDiagramsvirtual
GetPVAlgorithm()ttkTrackingFromPersistenceDiagramsvirtual
GetPX()ttkTrackingFromPersistenceDiagramsvirtual
GetPY()ttkTrackingFromPersistenceDiagramsvirtual
GetPZ()ttkTrackingFromPersistenceDiagramsvirtual
GetSpacing()ttkTrackingFromPersistenceDiagramsvirtual
getThreadNumber() constttk::BaseClassinline
GetTolerance()ttkTrackingFromPersistenceDiagramsvirtual
GetTriangulation(vtkDataSet *dataSet)ttkAlgorithm
GetUseGeometricSpacing()ttkTrackingFromPersistenceDiagramsvirtual
GetWassersteinMetric()ttkTrackingFromPersistenceDiagramsvirtual
inputData_ttk::TrackingFromPersistenceDiagramsprotected
IsA(const char *type)ttkTrackingFromPersistenceDiagramsvirtual
IsTypeOf(const char *type)ttkTrackingFromPersistenceDiagramsstatic
lastLineModettk::Debugprotectedstatic
lastObject_ttk::BaseClassprotected
MPIGhostPipelinePreconditioning(vtkDataSet *input)ttkAlgorithmprotected
MPIPipelinePreconditioning(vtkDataSet *input, std::vector< int > &neighbors, std::map< int, int > &neighToId, ttk::Triangulation *triangulation=nullptr)ttkAlgorithmprotected
MPITriangulationPreconditioning(ttk::Triangulation *triangulation, vtkDataSet *input)ttkAlgorithmprotected
New()ttkTrackingFromPersistenceDiagramsstatic
numberOfInputs_ttk::TrackingFromPersistenceDiagramsprotected
performMatchings(int numInputs, std::vector< ttk::DiagramType > &inputPersistenceDiagrams, std::vector< std::vector< MatchingType > > &outputMatchings, const std::string &algorithm, const std::string &wasserstein, double tolerance, double px, double py, double pz, double ps, double pe)ttk::TrackingFromPersistenceDiagramsprotected
performPostProcess(const std::vector< ttk::DiagramType > &allDiagrams, const std::vector< trackingTuple > &trackings, std::vector< std::set< int > > &trackingTupleToMerged, const double postProcThresh)ttk::TrackingFromPersistenceDiagramsprotected
performSingleMatching(int i, std::vector< ttk::DiagramType > &inputPersistenceDiagrams, std::vector< std::vector< MatchingType > > &outputMatchings, const std::string &algorithm, const std::string &wasserstein, double tolerance, double px, double py, double pz, double ps, double pe)ttk::TrackingFromPersistenceDiagramsprotected
performTracking(std::vector< ttk::DiagramType > &allDiagrams, std::vector< std::vector< MatchingType > > &allMatchings, std::vector< trackingTuple > &trackings)ttk::TrackingFromPersistenceDiagramsprotected
printErr(const std::string &msg, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cerr) constttk::Debuginline
printMsg(const std::string &msg, const debug::Priority &priority=debug::Priority::INFO, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) constttk::Debuginline
printMsg(const std::vector< std::string > &msgs, const debug::Priority &priority=debug::Priority::INFO, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) constttk::Debuginline
printMsg(const std::string &msg, const double &progress, const double &time, const int &threads, const double &memory, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) constttk::Debuginline
printMsg(const std::string &msg, const double &progress, const double &time, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) constttk::Debuginline
printMsg(const std::string &msg, const double &progress, const double &time, const int &threads, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) constttk::Debuginline
printMsg(const std::string &msg, const double &progress, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) constttk::Debuginline
printMsg(const std::string &msg, const double &progress, const debug::Priority &priority, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) constttk::Debuginline
printMsg(const std::vector< std::vector< std::string > > &rows, const debug::Priority &priority=debug::Priority::INFO, const bool hasHeader=true, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) constttk::Debuginline
printMsg(const debug::Separator &separator, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::INFO, std::ostream &stream=std::cout) constttk::Debuginline
printMsg(const debug::Separator &separator, const debug::Priority &priority, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) constttk::Debuginline
printMsg(const std::string &msg, const debug::Separator &separator, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::INFO, std::ostream &stream=std::cout) constttk::Debuginline
printMsgInternal(const std::string &msg, const std::string &right, const std::string &filler, const debug::Priority &priority=debug::Priority::INFO, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) constttk::Debuginlineprotected
printMsgInternal(const std::string &msg, const debug::Priority &priority, const debug::LineMode &lineMode, std::ostream &stream=std::cout) constttk::Debuginlineprotected
printWrn(const std::string &msg, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cerr) constttk::Debuginline
ProcessRequest(vtkInformation *request, vtkInformationVector **inputVectors, vtkInformationVector *outputVector) overridettkAlgorithm
RequestData(vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector) overridettkTrackingFromPersistenceDiagramsprotected
ttkAlgorithm::RequestData(vtkInformation *ttkNotUsed(request), vtkInformationVector **ttkNotUsed(inputVectors), vtkInformationVector *ttkNotUsed(outputVector))ttkAlgorithminlineprotectedvirtual
RequestDataNotGenerated(vtkInformation *ttkNotUsed(request), vtkInformationVector **ttkNotUsed(inputVectors), vtkInformationVector *ttkNotUsed(outputVector))ttkAlgorithminlineprotectedvirtual
RequestDataObject(vtkInformation *request, vtkInformationVector **inputVectors, vtkInformationVector *outputVector)ttkAlgorithmprotectedvirtual
RequestInformation(vtkInformation *ttkNotUsed(request), vtkInformationVector **ttkNotUsed(inputVectors), vtkInformationVector *ttkNotUsed(outputVector))ttkAlgorithminlineprotectedvirtual
RequestUpdateExtent(vtkInformation *ttkNotUsed(request), vtkInformationVector **ttkNotUsed(inputVectors), vtkInformationVector *ttkNotUsed(outputVector))ttkAlgorithminlineprotectedvirtual
RequestUpdateTime(vtkInformation *ttkNotUsed(request), vtkInformationVector **ttkNotUsed(inputVectors), vtkInformationVector *ttkNotUsed(outputVector))ttkAlgorithminlineprotectedvirtual
RequestUpdateTimeDependentInformation(vtkInformation *ttkNotUsed(request), vtkInformationVector **ttkNotUsed(inputVectors), vtkInformationVector *ttkNotUsed(outputVector))ttkAlgorithminlineprotectedvirtual
SafeDownCast(vtkObject *o)ttkTrackingFromPersistenceDiagramsstatic
SAME_DATA_TYPE_AS_INPUT_PORT()ttkAlgorithmstatic
SetCompactTriangulationCacheSize(float cacheSize)ttkAlgorithminline
SetDebugLevel(int debugLevel)ttkAlgorithminline
setDebugLevel(const int &debugLevel)ttk::Debugvirtual
setDebugMsgPrefix(const std::string &prefix)ttk::Debuginline
SetDistanceAlgorithm(const std::string &)ttkTrackingFromPersistenceDiagramsvirtual
SetDoPostProc(bool)ttkTrackingFromPersistenceDiagramsvirtual
SetInputData(vtkDataSet *)ttkAlgorithm
SetInputData(int, vtkDataSet *)ttkAlgorithm
setInputDataPointer(int idx, void *data)ttk::TrackingFromPersistenceDiagramsinlineprotected
setNumberOfInputs(int numberOfInputs)ttk::TrackingFromPersistenceDiagramsinlineprotected
SetPE(double)ttkTrackingFromPersistenceDiagramsvirtual
SetPostProcThresh(double)ttkTrackingFromPersistenceDiagramsvirtual
SetPS(double)ttkTrackingFromPersistenceDiagramsvirtual
SetPVAlgorithm(int)ttkTrackingFromPersistenceDiagramsvirtual
SetPX(double)ttkTrackingFromPersistenceDiagramsvirtual
SetPY(double)ttkTrackingFromPersistenceDiagramsvirtual
SetPZ(double)ttkTrackingFromPersistenceDiagramsvirtual
SetSpacing(double)ttkTrackingFromPersistenceDiagramsvirtual
SetThreadNumber(int threadNumber)ttkAlgorithminline
setThreadNumber(const int threadNumber)ttk::BaseClassinlinevirtual
SetTolerance(double)ttkTrackingFromPersistenceDiagramsvirtual
SetUseAllCores(bool useAllCores)ttkAlgorithminline
SetUseGeometricSpacing(bool)ttkTrackingFromPersistenceDiagramsvirtual
SetWassersteinMetric(const std::string &)ttkTrackingFromPersistenceDiagramsvirtual
setWrapper(const Wrapper *wrapper) overridettk::Debugvirtual
Superclass typedefttkTrackingFromPersistenceDiagrams
threadNumber_ttk::BaseClassmutableprotected
TrackingFromPersistenceDiagrams()ttk::TrackingFromPersistenceDiagramsprotected
ttkAlgorithm()ttkAlgorithmprotected
ttkTrackingFromPersistenceDiagrams()ttkTrackingFromPersistenceDiagramsprotected
UpdateThreadNumber()ttkAlgorithminline
welcomeMsg(std::ostream &stream)ttk::Debugprotected
wrapper_ttk::BaseClassprotected
~BaseClass()=defaultttk::BaseClassvirtual
~Debug() overridettk::Debug
~ttkAlgorithm() overridettkAlgorithmprotected