#include <TrackingFromPersistenceDiagrams.h>

Inheritance diagram for ttk::TrackingFromPersistenceDiagrams:

Public Member Functions
	TrackingFromPersistenceDiagrams ()

int	execute ()

int	performSingleMatching (int i, std::vector< ttk::DiagramType > &inputPersistenceDiagrams, std::vector< std::vector< MatchingType > > &outputMatchings, const std::string &algorithm, const std::string &wasserstein, double tolerance, double px, double py, double pz, double ps, double pe)

int	performMatchings (int numInputs, std::vector< ttk::DiagramType > &inputPersistenceDiagrams, std::vector< std::vector< MatchingType > > &outputMatchings, const std::string &algorithm, const std::string &wasserstein, double tolerance, double px, double py, double pz, double ps, double pe)

int	performTracking (std::vector< ttk::DiagramType > &allDiagrams, std::vector< std::vector< MatchingType > > &allMatchings, std::vector< trackingTuple > &trackings)

int	performPostProcess (const std::vector< ttk::DiagramType > &allDiagrams, const std::vector< trackingTuple > &trackings, std::vector< std::set< int > > &trackingTupleToMerged, const double postProcThresh)

int	setInputDataPointer (int idx, void *data)

void	setNumberOfInputs (int numberOfInputs)

Public Member Functions inherited from ttk::Debug
	Debug ()

	~Debug () override

virtual int	setDebugLevel (const int &debugLevel)

int	setWrapper (const Wrapper *wrapper) override

int	printMsg (const std::string &msg, const debug::Priority &priority=debug::Priority::INFO, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const

int	printMsg (const std::vector< std::string > &msgs, const debug::Priority &priority=debug::Priority::INFO, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const

int	printErr (const std::string &msg, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cerr) const

int	printWrn (const std::string &msg, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cerr) const

int	printMsg (const std::string &msg, const double &progress, const double &time, const int &threads, const double &memory, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) const

int	printMsg (const std::string &msg, const double &progress, const double &time, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) const

int	printMsg (const std::string &msg, const double &progress, const double &time, const int &threads, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) const

int	printMsg (const std::string &msg, const double &progress, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) const

int	printMsg (const std::string &msg, const double &progress, const debug::Priority &priority, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const

int	printMsg (const std::vector< std::vector< std::string > > &rows, const debug::Priority &priority=debug::Priority::INFO, const bool hasHeader=true, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const

int	printMsg (const debug::Separator &separator, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::INFO, std::ostream &stream=std::cout) const

int	printMsg (const debug::Separator &separator, const debug::Priority &priority, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const

int	printMsg (const std::string &msg, const debug::Separator &separator, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::INFO, std::ostream &stream=std::cout) const

void	setDebugMsgPrefix (const std::string &prefix)

Public Member Functions inherited from ttk::BaseClass
	BaseClass ()

virtual	~BaseClass ()=default

int	getThreadNumber () const

virtual int	setThreadNumber (const int threadNumber)

virtual int	setWrapper (const Wrapper *wrapper)

Protected Attributes
int	numberOfInputs_ {}

void **	inputData_ {}

Protected Attributes inherited from ttk::Debug
int	debugLevel_

std::string	debugMsgPrefix_

std::string	debugMsgNamePrefix_

Protected Attributes inherited from ttk::BaseClass
bool	lastObject_

int	threadNumber_

Wrapper *	wrapper_

Additional Inherited Members
Protected Member Functions inherited from ttk::Debug
int	printMsgInternal (const std::string &msg, const std::string &right, const std::string &filler, const debug::Priority &priority=debug::Priority::INFO, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const

int	printMsgInternal (const std::string &msg, const debug::Priority &priority, const debug::LineMode &lineMode, std::ostream &stream=std::cout) const

int	welcomeMsg (std::ostream &stream)

Static Protected Attributes inherited from ttk::Debug
static COMMON_EXPORTS debug::LineMode	lastLineMode = ttk::debug::LineMode::NEW

Detailed Description

Author: Maxime Soler soler.nosp@m..max.nosp@m.ime@t.nosp@m.otal.nosp@m..com

Date: August 2018.

Online examples:

Time tracking example

Author: Maxime Soler soler.nosp@m..max.nosp@m.ime@t.nosp@m.otal.nosp@m..com

Date: August 2018.

Definition at line 16 of file TrackingFromPersistenceDiagrams.h.

Constructor & Destructor Documentation

◆ TrackingFromPersistenceDiagrams()

ttk::TrackingFromPersistenceDiagrams::TrackingFromPersistenceDiagrams ( )

Definition at line 3 of file TrackingFromPersistenceDiagrams.cpp.

Member Function Documentation

◆ execute()

int ttk::TrackingFromPersistenceDiagrams::execute ( )

Execute the package.

Returns: Returns 0 upon success, negative values otherwise.

Definition at line 7 of file TrackingFromPersistenceDiagrams.cpp.

◆ performMatchings()

int ttk::TrackingFromPersistenceDiagrams::performMatchings	(	int	numInputs,
		std::vector< ttk::DiagramType > &	inputPersistenceDiagrams,
		std::vector< std::vector< MatchingType > > &	outputMatchings,
		const std::string &	algorithm,
		const std::string &	wasserstein,
		double	tolerance,
		double	px,
		double	py,
		double	pz,
		double	ps,
		double	pe
	)

Definition at line 58 of file TrackingFromPersistenceDiagrams.cpp.

◆ performPostProcess()

int ttk::TrackingFromPersistenceDiagrams::performPostProcess	(	const std::vector< ttk::DiagramType > &	allDiagrams,
		const std::vector< trackingTuple > &	trackings,
		std::vector< std::set< int > > &	trackingTupleToMerged,
		const double	postProcThresh
	)

Check proximity.

Merge!

Definition at line 176 of file TrackingFromPersistenceDiagrams.cpp.

◆ performSingleMatching()

int ttk::TrackingFromPersistenceDiagrams::performSingleMatching	(	int	i,
		std::vector< ttk::DiagramType > &	inputPersistenceDiagrams,
		std::vector< std::vector< MatchingType > > &	outputMatchings,
		const std::string &	algorithm,
		const std::string &	wasserstein,
		double	tolerance,
		double	px,
		double	py,
		double	pz,
		double	ps,
		double	pe
	)

Definition at line 28 of file TrackingFromPersistenceDiagrams.cpp.

◆ performTracking()

int ttk::TrackingFromPersistenceDiagrams::performTracking	(	std::vector< ttk::DiagramType > &	allDiagrams,
		std::vector< std::vector< MatchingType > > &	allMatchings,
		std::vector< trackingTuple > &	trackings
	)

Definition at line 87 of file TrackingFromPersistenceDiagrams.cpp.

◆ setInputDataPointer()

int ttk::TrackingFromPersistenceDiagrams::setInputDataPointer	(	int	idx,
		void *	data
	)

inline

Pass a pointer to an input array representing a scalarfield. The array is expected to be correctly allocated. idx in [0,numberOfInputs_[

Parameters

idx	Index of the input scalar field.
data	Pointer to the data array.

Returns: Returns 0 upon success, negative values otherwise.

See also: setNumberOfInputs() and setVertexNumber().

Definition at line 65 of file TrackingFromPersistenceDiagrams.h.

◆ setNumberOfInputs()

void ttk::TrackingFromPersistenceDiagrams::setNumberOfInputs ( int numberOfInputs )

inline

Set the number of input scalar fields

Parameters

numberOfInputs Number of input scalar fields.

Definition at line 75 of file TrackingFromPersistenceDiagrams.h.

Member Data Documentation

◆ inputData_

void** ttk::TrackingFromPersistenceDiagrams::inputData_ {}

protected

Definition at line 81 of file TrackingFromPersistenceDiagrams.h.

◆ numberOfInputs_

int ttk::TrackingFromPersistenceDiagrams::numberOfInputs_ {}