TTK base class that partially executes on a Rips complex the PairCells persistence algorithm where needed, when the persistence pairs are already known. More...

#include <PairCellsWithOracle.h>

Inheritance diagram for ttk::rpd::PairCellsWithOracle:

Public Member Functions
	PairCellsWithOracle (const PointCloud &points, MultidimensionalDiagram const &oracle, bool distanceMatrix=false, bool parallelSort=false)

	PairCellsWithOracle (float *data, int n, int dim, MultidimensionalDiagram const &oracle, bool parallelSort=false)

void	run ()

void	getGenerators (std::vector< Generator1 > &generators) const

void	getCascades (std::vector< Cascade > &cascades, EdgeSets3 &critical) const

void	getCascades (EdgeSets4 &critical) const

Public Member Functions inherited from ttk::Debug
	Debug ()

	~Debug () override

virtual int	setDebugLevel (const int &debugLevel)

int	setWrapper (const Wrapper *wrapper) override

int	printMsg (const std::string &msg, const debug::Priority &priority=debug::Priority::INFO, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const

int	printMsg (const std::vector< std::string > &msgs, const debug::Priority &priority=debug::Priority::INFO, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const

int	printErr (const std::string &msg, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cerr) const

int	printWrn (const std::string &msg, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cerr) const

int	printMsg (const std::string &msg, const double &progress, const double &time, const int &threads, const double &memory, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) const

int	printMsg (const std::string &msg, const double &progress, const double &time, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) const

int	printMsg (const std::string &msg, const double &progress, const double &time, const int &threads, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) const

int	printMsg (const std::string &msg, const double &progress, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) const

int	printMsg (const std::string &msg, const double &progress, const debug::Priority &priority, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const

int	printMsg (const std::vector< std::vector< std::string > > &rows, const debug::Priority &priority=debug::Priority::INFO, const bool hasHeader=true, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const

int	printMsg (const debug::Separator &separator, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::INFO, std::ostream &stream=std::cout) const

int	printMsg (const debug::Separator &separator, const debug::Priority &priority, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const

int	printMsg (const std::string &msg, const debug::Separator &separator, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::INFO, std::ostream &stream=std::cout) const

void	setDebugMsgPrefix (const std::string &prefix)

Public Member Functions inherited from ttk::BaseClass
	BaseClass ()

virtual	~BaseClass ()=default

int	getThreadNumber () const

virtual int	setThreadNumber (const int threadNumber)

Static Public Member Functions
static void	callOracle (const PointCloud &points, MultidimensionalDiagram &oracle, double threshold=inf, bool distanceMatrix=false)

Additional Inherited Members
Protected Member Functions inherited from ttk::Debug
int	printMsgInternal (const std::string &msg, const std::string &right, const std::string &filler, const debug::Priority &priority=debug::Priority::INFO, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const

int	printMsgInternal (const std::string &msg, const debug::Priority &priority, const debug::LineMode &lineMode, std::ostream &stream=std::cout) const

int	welcomeMsg (std::ostream &stream)

Protected Attributes inherited from ttk::Debug
int	debugLevel_

std::string	debugMsgPrefix_

std::string	debugMsgNamePrefix_

Protected Attributes inherited from ttk::BaseClass
bool	lastObject_

int	threadNumber_

Wrapper *	wrapper_

Static Protected Attributes inherited from ttk::Debug
static COMMON_EXPORTS debug::LineMode	lastLineMode = ttk::debug::LineMode::NEW

Detailed Description

TTK base class that partially executes on a Rips complex the PairCells persistence algorithm where needed, when the persistence pairs are already known.

Author: Mattéo Clémot matte.nosp@m.o.cl.nosp@m.emot@.nosp@m.univ.nosp@m.-lyon.nosp@m.1.fr

Date: February 2025.

This module defines the PairCellsWithOracle class that takes a point cloud and enables to compute the persistent generators and the persistent cascades of its Rips complex, when the persistence pairs have already been computed

Definition at line 23 of file PairCellsWithOracle.h.

Constructor & Destructor Documentation

◆ PairCellsWithOracle() [1/2]

ttk::rpd::PairCellsWithOracle::PairCellsWithOracle	(	const PointCloud &	points,
		MultidimensionalDiagram const &	oracle,
		bool	distanceMatrix = false,
		bool	parallelSort = false )

Definition at line 6 of file PairCellsWithOracle.cpp.

◆ PairCellsWithOracle() [2/2]

ttk::rpd::PairCellsWithOracle::PairCellsWithOracle	(	float *	data,
		int	n,
		int	dim,
		MultidimensionalDiagram const &	oracle,
		bool	parallelSort = false )

Definition at line 32 of file PairCellsWithOracle.cpp.

Member Function Documentation

◆ callOracle()

void ttk::rpd::PairCellsWithOracle::callOracle	(	const PointCloud &	points,
		MultidimensionalDiagram &	oracle,
		double	threshold = inf,
		bool	distanceMatrix = false )

static

Definition at line 53 of file PairCellsWithOracle.cpp.

◆ getCascades() [1/2]

void ttk::rpd::PairCellsWithOracle::getCascades ( EdgeSets4 & critical ) const

Definition at line 187 of file PairCellsWithOracle.cpp.

◆ getCascades() [2/2]

void ttk::rpd::PairCellsWithOracle::getCascades	(	std::vector< Cascade > &	cascades,
		EdgeSets3 &	critical ) const

Definition at line 175 of file PairCellsWithOracle.cpp.

◆ getGenerators()

void ttk::rpd::PairCellsWithOracle::getGenerators ( std::vector< Generator1 > & generators ) const

Definition at line 163 of file PairCellsWithOracle.cpp.

◆ run()

void ttk::rpd::PairCellsWithOracle::run ( )

Definition at line 73 of file PairCellsWithOracle.cpp.

The documentation for this class was generated from the following files:

/home/julien/Pro/git/github/thomas/ttk-dani/core/base/ripsPersistenceDiagram/PairCellsWithOracle.h
/home/julien/Pro/git/github/thomas/ttk-dani/core/base/ripsPersistenceDiagram/PairCellsWithOracle.cpp

Public Member Functions

Static Public Member Functions

Additional Inherited Members