TTK trackingFromOverlap processing package that tracks labeled point sets. More...

#include <TrackingFromOverlap.h>

Inheritance diagram for ttk::TrackingFromOverlap:

Classes
struct	CoordinateComparator

struct	Node

Public Types
using	Edges = std::vector< idType >

using	Nodes = std::vector< Node >

Public Member Functions
	TrackingFromOverlap ()

	~TrackingFromOverlap () override=default

int	sortCoordinates (const float *pointCoordinates, const size_t nPoints, std::vector< size_t > &sortedIndices) const

int	computeBranches (std::vector< Edges > &timeEdgesMap, std::vector< Nodes > &timeNodesMap) const

template<typename labelType >
int	computeLabelIndexMap (const labelType *pointLabels, const size_t nPoints, std::map< labelType, size_t > &labelIndexMap) const

template<typename labelType >
int	computeNodes (const float pointCoordinates, const labelType pointLabels, const size_t nPoints, Nodes &nodes) const

template<typename labelType >
int	computeOverlap (const float pointCoordinates0, const float pointCoordinates1, const labelType pointLabels0, const labelType pointLabels1, const size_t nPoints0, const size_t nPoints1, Edges &edges) const

Public Member Functions inherited from ttk::Debug
	Debug ()

	~Debug () override

virtual int	setDebugLevel (const int &debugLevel)

int	setWrapper (const Wrapper *wrapper) override

int	printMsg (const std::string &msg, const debug::Priority &priority=debug::Priority::INFO, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const

int	printMsg (const std::vector< std::string > &msgs, const debug::Priority &priority=debug::Priority::INFO, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const

int	printErr (const std::string &msg, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cerr) const

int	printWrn (const std::string &msg, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cerr) const

int	printMsg (const std::string &msg, const double &progress, const double &time, const int &threads, const double &memory, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) const

int	printMsg (const std::string &msg, const double &progress, const double &time, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) const

int	printMsg (const std::string &msg, const double &progress, const double &time, const int &threads, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) const

int	printMsg (const std::string &msg, const double &progress, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::PERFORMANCE, std::ostream &stream=std::cout) const

int	printMsg (const std::string &msg, const double &progress, const debug::Priority &priority, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const

int	printMsg (const std::vector< std::vector< std::string > > &rows, const debug::Priority &priority=debug::Priority::INFO, const bool hasHeader=true, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const

int	printMsg (const debug::Separator &separator, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::INFO, std::ostream &stream=std::cout) const

int	printMsg (const debug::Separator &separator, const debug::Priority &priority, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const

int	printMsg (const std::string &msg, const debug::Separator &separator, const debug::LineMode &lineMode=debug::LineMode::NEW, const debug::Priority &priority=debug::Priority::INFO, std::ostream &stream=std::cout) const

void	setDebugMsgPrefix (const std::string &prefix)

Public Member Functions inherited from ttk::BaseClass
	BaseClass ()

virtual	~BaseClass ()=default

int	getThreadNumber () const

virtual int	setThreadNumber (const int threadNumber)

virtual int	setWrapper (const Wrapper *wrapper)

Additional Inherited Members
Protected Member Functions inherited from ttk::Debug
int	printMsgInternal (const std::string &msg, const std::string &right, const std::string &filler, const debug::Priority &priority=debug::Priority::INFO, const debug::LineMode &lineMode=debug::LineMode::NEW, std::ostream &stream=std::cout) const

int	printMsgInternal (const std::string &msg, const debug::Priority &priority, const debug::LineMode &lineMode, std::ostream &stream=std::cout) const

int	welcomeMsg (std::ostream &stream)

Protected Attributes inherited from ttk::Debug
int	debugLevel_

std::string	debugMsgPrefix_

std::string	debugMsgNamePrefix_

Protected Attributes inherited from ttk::BaseClass
bool	lastObject_

int	threadNumber_

Wrapper *	wrapper_

Static Protected Attributes inherited from ttk::Debug
static COMMON_EXPORTS debug::LineMode	lastLineMode = ttk::debug::LineMode::NEW

Detailed Description

TTK trackingFromOverlap processing package that tracks labeled point sets.

Author: Jonas Lukasczyk jl@jl.nosp@m.uk.d.nosp@m.e

Date: 01.09.2018

TrackingFromOverlap is a TTK processing package that provides algorithms to track labeled point sets across time (and optionally levels) based on spatial overlap, where two points overlap iff their corresponding coordinates are equal.

Related publication:
'Nested Tracking Graphs' Jonas Lukasczyk, Gunther Weber, Ross Maciejewski, Christoph Garth, and Heike Leitte. Computer Graphics Forum (Special Issue, Proceedings Eurographics / IEEE Symposium on Visualization). Vol. 36. No. 3. 2017.

Online examples:

Nested Tracking from Overlap example

Definition at line 53 of file TrackingFromOverlap.h.

Member Typedef Documentation

◆ Edges

using ttk::TrackingFromOverlap::Edges = std::vector<idType>

Definition at line 74 of file TrackingFromOverlap.h.

◆ Nodes

using ttk::TrackingFromOverlap::Nodes = std::vector<Node>

Definition at line 75 of file TrackingFromOverlap.h.

Constructor & Destructor Documentation

◆ TrackingFromOverlap()

ttk::TrackingFromOverlap::TrackingFromOverlap ( )

inline

Definition at line 55 of file TrackingFromOverlap.h.

◆ ~TrackingFromOverlap()

ttk::TrackingFromOverlap::~TrackingFromOverlap ( )

overridedefault

Member Function Documentation

◆ computeBranches()

int ttk::TrackingFromOverlap::computeBranches	(	std::vector< Edges > &	timeEdgesMap,
		std::vector< Nodes > &	timeNodesMap
	)		const

inline

Definition at line 114 of file TrackingFromOverlap.h.

◆ computeLabelIndexMap()

template<typename labelType >

int ttk::TrackingFromOverlap::computeLabelIndexMap	(	const labelType *	pointLabels,
		const size_t	nPoints,
		std::map< labelType, size_t > &	labelIndexMap
	)		const

Definition at line 245 of file TrackingFromOverlap.h.

◆ computeNodes()

template<typename labelType >

int ttk::TrackingFromOverlap::computeNodes	(	const float *	pointCoordinates,
		const labelType *	pointLabels,
		const size_t	nPoints,
		Nodes &	nodes
	)		const

Definition at line 261 of file TrackingFromOverlap.h.

◆ computeOverlap()

template<typename labelType >

int ttk::TrackingFromOverlap::computeOverlap	(	const float *	pointCoordinates0,
		const float *	pointCoordinates1,
		const labelType *	pointLabels0,
		const labelType *	pointLabels1,
		const size_t	nPoints0,
		const size_t	nPoints1,
		Edges &	edges
	)		const

Definition at line 307 of file TrackingFromOverlap.h.

◆ sortCoordinates()

int ttk::TrackingFromOverlap::sortCoordinates	(	const float *	pointCoordinates,
		const size_t	nPoints,
		std::vector< size_t > &	sortedIndices
	)		const

inline

Definition at line 95 of file TrackingFromOverlap.h.

The documentation for this class was generated from the following file:

/home/julien/Pro/git/github/ttk-tierny/core/base/trackingFromOverlap/TrackingFromOverlap.h

Classes

Public Types

Public Member Functions

Additional Inherited Members

Detailed Description

Member Typedef Documentation

◆ Edges

◆ Nodes

Constructor & Destructor Documentation

◆ TrackingFromOverlap()

◆ ~TrackingFromOverlap()

Member Function Documentation

◆ computeBranches()

◆ computeLabelIndexMap()

◆ computeNodes()

◆ computeOverlap()

◆ sortCoordinates()